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Dosage compensation defects due toRNA loss are rescued by recalibration of X/autosome stoichiometry

Source: PubMed Central Open Access, NCBI / U.S. National Library of Medicine

Nucleic Acids ResearchLast synced 6/29/2026Status: syncedPMID: 42363765 pmidDOI: 10.1093/nar/gkag649

Abstract Metazoa evolved regulatory networks to balance sex chromosome expression. In, males have a single gene-rich X chromosome, whereas females have two. Balanced X/autosome expression is essential for viability, and in male flies is achieved by activation of genes on the X through the male-specific-lethal (MSL) dosage compensation complex (DCC). This ribonucleoprotein assembly contains long non-codingRNAs. To dissect the functional requirements ofin a cell-based system, we deleted thegene in male S2 cells and selected two independent lines lacking detectableRNA. In the absence of, the remaining MSL protein complex was unable to associate with known or newly identified binding sites and thus failed to activate transcription. Surprisingly, the X/autosome expression ratio appeared nevertheless compensated. Cytogenetic and genomic analyses revealed that both-deficient cell populations had acquired additional X chromosomes. We propose that uncompensated X expression compromises fitness and gives a selective growth advantage to cells that rebalance their genomes through chromosome mis-segregation. Remarkably, ectopic expression ofreversed this selection, restored DCC binding, and normalized the karyotype. These findings illustrate that X chromosome dosage compensation is critical for viability even in cultured cells, and provide a striking example of rapid evolution under stringent selection. Graphical Abstract Graphical Abstract For image description, please refer to the figur

Abstract

Abstract Metazoa evolved regulatory networks to balance sex chromosome expression. In, males have a single gene-rich X chromosome, whereas females have two. Balanced X/autosome expression is essential for viability, and in male flies is achieved by activation of genes on the X through the male-specific-lethal (MSL) dosage compensation complex (DCC). This ribonucleoprotein assembly contains long non-codingRNAs. To dissect the functional requirements ofin a cell-based system, we deleted thegene in male S2 cells and selected two independent lines lacking detectableRNA. In the absence of, the remaining MSL protein complex was unable to associate with known or newly identified binding sites and thus failed to activate transcription. Surprisingly, the X/autosome expression ratio appeared nevertheless compensated. Cytogenetic and genomic analyses revealed that both-deficient cell populations had acquired additional X chromosomes. We propose that uncompensated X expression compromises fitness and gives a selective growth advantage to cells that rebalance their genomes through chromosome mis-segregation. Remarkably, ectopic expression ofreversed this selection, restored DCC binding, and normalized the karyotype. These findings illustrate that X chromosome dosage compensation is critical for viability even in cultured cells, and provide a striking example of rapid evolution under stringent selection. Graphical Abstract Graphical Abstract For image description, please refer to the figure legend and surrounding text. http://www.w3.org/1999/xlink float portrait gkag649figgra1.jpg float ga1 portrait graphical

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